keirasan - 1 year ago 81

Python Question

I would like to create a generic script to perform linear regressions on multiple data sets. Each data set will have the same y-variable called "SM" and an unknown number of x-variables. I have been able to do this successfully if I know exactly which data will be used for the regression. For example:

`import pandas`

import statsmodels.api as sm

import statsmodels.formula.api as smf

from patsy import dmatrices

data = pandas.read_excel('test.xlsx')

Then, print data gives:

`print data`

SM Glass mag

SiO2 73.500 77.27 0.00

TiO2 0.233 0.15 7.37

Al2O3 11.230 11.49 0.00

FeO* 4.240 2.85 92.46

MnO 0.082 0.06 0.00

MgO 0.040 0.00 0.00

CaO 0.410 0.22 0.00

Na2O 5.630 4.58 0.00

K2O 4.620 3.38 0.00

Then I prepare the dataframe and do the linear regression:

`y, X = dmatrices('SM ~ Glass + mag', data=data, return_type='dataframe')`

mod = sm.OLS(y, X)

res = mod.fit()

print res.summary()

This all works great. BUT, I'd like to be able to import an excel file with an unknown number of columns so I can do:

`y, X = dmatrices('SM ~ X1 + X2 + X3 + ... Xn', data=data, return_type='dataframe')`

I can parse the data frame and pull out individual columns, but I don't know how to them put them into the formula needed to do the linear regression. Any advice is appreciated!

Answer Source

See if this works:

```
df = pd.DataFrame(np.arange(20).reshape(2, 10), columns=list('abcdefghij'))
formula = '{} ~ {}'.format(df.columns[0], ' + '.join(df.columns[1:]))
formula
'a ~ b + c + d + e + f + g + h + i + j'
```